Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877601.1_cds_XP_016436520.1_32372
CDS Infomation

[gene=LOC107762661] [db_xref=GeneID:107762661] [protein=laccase-12-like] [protein_id=XP_016436520.1] [location=join(6820..6930,7023..7174,7278..7522,7669..7797,8036..8992,9109..9239)] [gbkey=CDS]
Sequence

ATGGAGCCCTTCAACAGCATTGCCAACCCTTTGAGTTCTTTCTTCTTTATCTGCATTTTG
CTTCTCTTGGCAAATGCAGCATCTGGCAAAACTCACCACCATGATTTTGTTATTCAAGCA
ACACCAGTGAAGAGGCTGTGCAAGACTCACAACACCATAACGGTGAATGGACAATTCCCT
GGACCAACATTAGAAGTAAACAATGGGGATACTCTAGTTGTCAAAGTTGTCAATAGAGCT
CGATACAATGTCACCATTCACTGGCATGGAGTAAGGCAAATGAGGACAGGATGGGCAGAT
GGACCAGAATTTATCACTCAGTGCCCAATTAGACCAGGAAAGAGTTACACCTACCGGTTT
ACCATTCAAGGACAGGAAGGGACTCTTTGGTGGCACGCTCATAGCTCGTGGCTCAGGGCC
ACTGTTTATGGAGCTCTAATTATCCACCCCAAAGACGGAGGCTCATATCCATTTGCTAAG
CCCAAAAGAGAAACACCAATTCTGCTAGGTGAGTGGTGGGATGCAAATCCTATTGACGTT
ATAAGACAAGCGACAAGAACAGGAGCAGCTCCTAATGTATCAGATGCATACACCATTAAT
GGTCAACCAGGTGACCTCTACAAGTGTTCCAGTCAAGATACTACCATAGTCCATGTGGAC
TCAGGCGAAACCAACCTCCTCCGAGTTATCAACGCTGCACTCAACCAACAACTTTTCTTT
TCCGTGGCCAACCACAAACTTACTGTTGTTGGGGCAGATGCCTCTTATGTTAAATCCTTC
ACAACATCAGTGCTTATGCTCGGACCAGGCCAGACAACTGATGTGCTGATCAAAGCTGAT
CAGCAACCAGCCAAATACTACATGGCAGCACGTGCCTATGCTAGCGCTCAAGGCGCGCCC
TTTGATAATACCACAACCACTGCCATCCTTGAGTACAAGACAGCTTCTTGTTCTTCCAAT
TGTGCCAAGACCAATGCAGTTTTCCCATCTTTACCGGCATATAACGACACAGTCACTGCA
ACGGCCTTCACAACCAAATTCAGAAGCCCAAGAAAGGTCGAGGTGCCTAAGGAAATTGAT
GAAAATCTATTCTTCACAGTCGGGCTAGGACTCGATAACTGCCCAAGAGGTGCAAGCTCG
AGTAATTGTCAAGGTCCAAATGGAACTCGATTCACTGCCAGTATGAACAATGTTTCTTTT
GTGCTACCATCCAACTTTTCCCTGCTGCAAGCGCATCACCAAGGCATACCTGGTGTCTTC
TCAACTGATTTCCCAGCAAAACCACCTGTAAAATTTGATTACACGGGTAATGTAAGCCGA
TCACTCTGGCAACCTATTCGAGGAACAAAGCTGTACAAGCTGAAATATGGCGCAAGAGTG
CAGGTTGTGTTACAGGGGACAAGCATCTTTACAGCTGAGAACCACCCAATTCATCTGCAT
GGATATGATTTTTACATAATTGCAGAGGGTTTCGGTAACTTTAATCCAAAGAGAGATGCA
ACTAAATTCAACATAGTTGATCCACCTCTCAGAAATACGGCCAGTGTACCCGTTAATGGA
TGGGCAGTTATCAGATTTGTCGCTGACAATCCAGGAGTGTGGCTAATGCATTGTCACTTG
GATGTTCACATCGGCTGGGGTTTGGCGATGGCGTTCCTTGTGGAAAACGGAATTAGTGAA
GTGGAATCATTGGAGGCTCCTCCAGTAGATCTTCCTGTCTGTTGA

Peptide Sequence

PEP ID

XP_016436520.1
PEP Infomation

PREDICTED: laccase-12-like [Nicotiana tabacum]
Sequence

MEPFNSIANPLSSFFFICILLLLANAASGKTHHHDFVIQATPVKRLCKTHNTITVNGQFP
GPTLEVNNGDTLVVKVVNRARYNVTIHWHGVRQMRTGWADGPEFITQCPIRPGKSYTYRF
TIQGQEGTLWWHAHSSWLRATVYGALIIHPKDGGSYPFAKPKRETPILLGEWWDANPIDV
IRQATRTGAAPNVSDAYTINGQPGDLYKCSSQDTTIVHVDSGETNLLRVINAALNQQLFF
SVANHKLTVVGADASYVKSFTTSVLMLGPGQTTDVLIKADQQPAKYYMAARAYASAQGAP
FDNTTTTAILEYKTASCSSNCAKTNAVFPSLPAYNDTVTATAFTTKFRSPRKVEVPKEID
ENLFFTVGLGLDNCPRGASSSNCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHQGIPGVF
STDFPAKPPVKFDYTGNVSRSLWQPIRGTKLYKLKYGARVQVVLQGTSIFTAENHPIHLH
GYDFYIIAEGFGNFNPKRDATKFNIVDPPLRNTASVPVNGWAVIRFVADNPGVWLMHCHL
DVHIGWGLAMAFLVENGISEVESLEAPPVDLPVC

Transcript Sequence

Gene sequence data has not been registered.